Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890498.1_cds_XP_016445222.1_40202
CDS Infomation

[gene=LOC107770426] [db_xref=GeneID:107770426] [protein=butyrate--CoA ligase AAE11, peroxisomal-like] [protein_id=XP_016445222.1] [location=join(31979..32176,32500..32893,32980..34142)] [gbkey=CDS]
Sequence

ATGGATAGATTACCAAAATGTGGAGCAAATTATGTGCCTCTAACTCCTCTTACCTTCTTA
ACTAGGGCATCCAAATGTTATGCCAATAGAACATCCATCATCTATGGTGATATCCGTTTC
ACATGGAGCCAAACTTACAAGCGTTGTTGTCGCCTCGCCTCCTCCCTTCGATCCCTAAAC
ATTGTCAAGAACGACGTGGTTTCAGTGTTGGCTCCAAATGTTCCAGCAATGTATGAAATG
CATTTTGCTGTGCCAATGGCGGGAGCTGTGTTGAATGCAATCAATACAAGGCTAGATGCT
AAGAACATTGCAGTCATTCTCAAACACTCTGAAGCCAAAGTATTTCTTGTTGATTATGAA
TACCTAGAAATTGCAAAAAAGGCCCTCGAACTTCTAGTGGCCGACTTTGAGAAGTCCAAA
ACTTCTGAAATGCTGATGCCTCTCGTCGTTGTCATTGATGACATCAACTCCCCTACCGGA
ATCCGGCTAGGCGAGCTCGAGTACGAGCAATTGGTGTTCCAAGGAAATACAAGTTACATC
CCCGAAGAAATTACCGATGAATGGGATCCAATTACCTTGAATTATACATCAGGTACGACT
TCAGATCCTAAGGGAGTTGTGTACAGTCATAGAGGAGCATATTTGAGCACTTTGAGTTTA
ACATTAGGTTGGGAAATGGGTACTGAACCTGTCTATTTATGGTCCTTACCAATGTTTCAT
TGCAATGGATGGACTTTCACTTGGGGCATAGCTGCAAGAGGTGGGACCAATATTTGCATT
CGCAATACTACAGCCCAAGAAATGTACACAAACATAGTGTCGCATAACGTTACACATATG
TGTTGTGCACCTATTGTTTTCAACATCCTTCTCGAAGCGAAACCACATGAATACAAAGCC
ATAACAACCCGAGTCCAAATTCTAACAGGTGGCGCACCACCACATGCGTCACTTTTAGAG
AAAATTGAAAGACTCGGGTTCCATGTGGTCCATGCTTATGGGCTCACCGAGGCCACAGGC
CCAGCCCTTGTATGTGAATGGCAACAAAAATGGAACAAATTGCCTAGTGAAAATAAATCC
AAGTTGAAAGCAAGACAAGGAGTTGGGATTTTAACACTAGCCGATGTTGATGTGAAAAAT
TTCAAGAATATGCAAAGTGTGCCACGAGATGGAAAATCAATAGGGGAAATATGTTTACGA
GGGAGTAGTATTATGAAAGGGTATTTCAAGAATGACAAAGCGAATTCGGAAGTATTTAAA
AATGGTTGGTTTTTTACTGGAGATGTTGGAGTAATTCACTCAGATGGGTATTTGGAAATT
AAAGATAGAAGCAAAGATGTGATAATTTCAGGTGGAGAAAATATTAGTAGTATTGAAGTT
GAAAATGCAATTATGAGACATCCAAATGTAGTAGAAGCTTCTGTTGTGGCCATGCCACAT
TTCAGATGGGGTGAAAGTCCATGTGCATTTGTTATATTGCGCAGAAATTCAGAAATTAAA
GAAGTTGATATTATTGCTTATTGTAAATCAAATTTGCCAGGATTTATGGTACCAAAAAAG
GTGAAATTTGTGGAAAATTTACCTAAGACTGGAACTGGGAAAGTACAGAAACACCATTTG
AGAGCAATAGCTAAAACTTTTGTTATTTCAGAAAAGTCAAATCAAACAAACAAGAAAACA
AGTCAAGTCAACAGGGAAAAGGCGAGATATTACGATCAAAATCAGGAGCAGATTCTTGCT
TTGTCTCGTTTATAG

Peptide Sequence

PEP ID

XP_016445222.1
PEP Infomation

PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Nicotiana tabacum]
Sequence

MDRLPKCGANYVPLTPLTFLTRASKCYANRTSIIYGDIRFTWSQTYKRCCRLASSLRSLN
IVKNDVVSVLAPNVPAMYEMHFAVPMAGAVLNAINTRLDAKNIAVILKHSEAKVFLVDYE
YLEIAKKALELLVADFEKSKTSEMLMPLVVVIDDINSPTGIRLGELEYEQLVFQGNTSYI
PEEITDEWDPITLNYTSGTTSDPKGVVYSHRGAYLSTLSLTLGWEMGTEPVYLWSLPMFH
CNGWTFTWGIAARGGTNICIRNTTAQEMYTNIVSHNVTHMCCAPIVFNILLEAKPHEYKA
ITTRVQILTGGAPPHASLLEKIERLGFHVVHAYGLTEATGPALVCEWQQKWNKLPSENKS
KLKARQGVGILTLADVDVKNFKNMQSVPRDGKSIGEICLRGSSIMKGYFKNDKANSEVFK
NGWFFTGDVGVIHSDGYLEIKDRSKDVIISGGENISSIEVENAIMRHPNVVEASVVAMPH
FRWGESPCAFVILRRNSEIKEVDIIAYCKSNLPGFMVPKKVKFVENLPKTGTGKVQKHHL
RAIAKTFVISEKSNQTNKKTSQVNREKARYYDQNQEQILALSRL

Transcript Sequence

Gene sequence data has not been registered.